- Updated the decision structure to use 'thought' instead of 'decision' in various functions and tests.
- Refactored decision-building functions to align with the new structure.
- Adjusted tests to accommodate the changes in decision structure, ensuring consistency across the codebase.
- Removed the delivery summary test as it was no longer relevant.
- Added new tests for handling references in the brain's next action.
- Introduced markdown reference parsing tests to validate reference handling.
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